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Application of AOP Methodology in Eclipse-AJDT Environment for Developing Bioinformatics Software

Published on None 2011 by Amita Sharma, S.S. Sarangdevot
journal_cover_thumbnail

International Conference and Workshop on Emerging Trends in Technology
Foundation of Computer Science USA
ICWET - Number 15
None 2011
Authors: Amita Sharma, S.S. Sarangdevot
f0b9ae1d-4b76-414f-a811-f29bc53a4e78

Amita Sharma, S.S. Sarangdevot . Application of AOP Methodology in Eclipse-AJDT Environment for Developing Bioinformatics Software. International Conference and Workshop on Emerging Trends in Technology. ICWET, 15 (None 2011), 19-26.

@article{
author = { Amita Sharma, S.S. Sarangdevot },
title = { Application of AOP Methodology in Eclipse-AJDT Environment for Developing Bioinformatics Software },
journal = { International Conference and Workshop on Emerging Trends in Technology },
issue_date = { None 2011 },
volume = { ICWET },
number = { 15 },
month = { None },
year = { 2011 },
issn = 0975-8887,
pages = { 19-26 },
numpages = 8,
url = { /proceedings/icwet/number15/2176-se243/ },
publisher = {Foundation of Computer Science (FCS), NY, USA},
address = {New York, USA}
}
%0 Proceeding Article
%1 International Conference and Workshop on Emerging Trends in Technology
%A Amita Sharma
%A S.S. Sarangdevot
%T Application of AOP Methodology in Eclipse-AJDT Environment for Developing Bioinformatics Software
%J International Conference and Workshop on Emerging Trends in Technology
%@ 0975-8887
%V ICWET
%N 15
%P 19-26
%D 2011
%I International Journal of Computer Applications
Abstract

The application of Aspect-Oriented Programming (AOP) methodology has been investigated in the development of Bioinformatics software – Bioseqsearch. This software aims to reveal the biological significance of an unknown sequence using similarity search through biological databases using NCBI BLAST via internet. The complexity of the design has been significantly reduced by achieving better separation of concerns through modularization of identified crosscutting concerns, thus eliminating the problems of code scattering and tangling. The impact of using this methodology on various quality factors of the software has been examined. The study concludes that AOP methodology in Eclipse-AJDT environment is highly useful in design and implementation of efficient, cost-effective and quality bioinformatics software projects.

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Index Terms

Computer Science
Information Sciences

Keywords

Aspect-Oriented Programming Separation of Concerns Bioinformatics Software Eclipse-AJDT