CFP last date
20 December 2024
Reseach Article

Digital Encoding to the form of Amino Acids for DNA Cryptography and Biological Simulation

by Mona Sabry, Mohamed Hashem, Taymoor Nazmy
International Journal of Computer Applications
Foundation of Computer Science (FCS), NY, USA
Volume 165 - Number 10
Year of Publication: 2017
Authors: Mona Sabry, Mohamed Hashem, Taymoor Nazmy
10.5120/ijca2017913972

Mona Sabry, Mohamed Hashem, Taymoor Nazmy . Digital Encoding to the form of Amino Acids for DNA Cryptography and Biological Simulation. International Journal of Computer Applications. 165, 10 ( May 2017), 15-20. DOI=10.5120/ijca2017913972

@article{ 10.5120/ijca2017913972,
author = { Mona Sabry, Mohamed Hashem, Taymoor Nazmy },
title = { Digital Encoding to the form of Amino Acids for DNA Cryptography and Biological Simulation },
journal = { International Journal of Computer Applications },
issue_date = { May 2017 },
volume = { 165 },
number = { 10 },
month = { May },
year = { 2017 },
issn = { 0975-8887 },
pages = { 15-20 },
numpages = {9},
url = { https://ijcaonline.org/archives/volume165/number10/27608-2017913972/ },
doi = { 10.5120/ijca2017913972 },
publisher = {Foundation of Computer Science (FCS), NY, USA},
address = {New York, USA}
}
%0 Journal Article
%1 2024-02-07T00:12:04.529453+05:30
%A Mona Sabry
%A Mohamed Hashem
%A Taymoor Nazmy
%T Digital Encoding to the form of Amino Acids for DNA Cryptography and Biological Simulation
%J International Journal of Computer Applications
%@ 0975-8887
%V 165
%N 10
%P 15-20
%D 2017
%I Foundation of Computer Science (FCS), NY, USA
Abstract

In a way to minimize the gap between digital computing and DNA computing, it is needed to transfer DNA between the two fields, and to make use of the two technologies in generating ideas of data integrity and information security. One of the critical problems in amino acid analysis is how to establish a digital coding system to better reflect the properties of amino acids and their degeneracy. This paper introduces a method to convert digital data to the form of DNA and then to the form of amino acids using the natural RNA codons distribution on the 20 natural amino acids which preserves their biological properties. The Decoding method also convert the amino acids to a digital form. The method solves the problem of ambiguity that more than one codon correspond to the same amino acid. Applicability and reversibility of the method is proven and successfully implemented. The presented encoding method can serve in DNA computers and biological experiments by representing data in the form of amino acids. This mainly aims at increasing the flexibility of converting data between biological medium and digital medium. Although it does not include the use of secret key but it can also be used as an auxiliary factor in cryptographic and steganographic applications like data integrity and digital signature.

References
  1. Sabry Mona, Hashem M., Nazmy Taymoor, September 2012, Three Reversible Data Encoding Algorithms based on DNA and Amino Acids Structure. International Journal of Computer Applications (IJCA), 54(8):24-30, Published by Foundation of Computer Science, New York, USA.
  2. Kari L., 1997, DNA Computing: Arrival of Biological Mathematics,” The Mathematical Tntelligencer, 19, pp. 9–22.
  3. Kartalopoulos S.V., 2005, DNA-inspired cryptographic method in optical communications, in Authentication and Data Mimicking Military Communications Conference 2005, pp. 774–779.
  4. Lu M. X., 2007, Symmetric-key cryptosystem with DNA technology, Science in China Series F: Information Sciences, vol. 3, pp. 324–333.
  5. Gehani A., LaBean T. H. and Reif J. H., 2000, DNA-based cryptography, DNA Based Computers V. Providence: American Mathematical society, vol. 54, pp. 233–249.
  6. Celland C. T., Risca V. and Bancroft C., 1999, Hiding messages in DNA microdots, Nature, vol. 399, pp. 533–534.
  7. KANG Ning, October, 2004, A Pseudo DNA Cryptography Method, Independent Research Study Project for CS5231.
  8. Heider Dominik and Barnekow Angelika. 2007, DNA-based watermarks using the DNA-crypt algorithm. BMC bioinformatics, 8(1):176.
  9. Sabry Mona, Hashem M., Nazmy Taymoor, Khalifa M.E., 2010, A DNA and Amino Acids-Based Implementation of Playfair Cipher, International Journal of Computer Science and Information Security (IJCSIS), 8(3).
  10. Nixon, D., 2002, DNA and DNA Computing in Security Practices – Is the Future in Our Genes? GSEC Assignment Version 1.3, SANS Institute.
  11. Stallings W., 2003, Cryptography and Network Security, Third Edition, Prentice Hall International.
Index Terms

Computer Science
Information Sciences

Keywords

Amino acids binary data digital encoding DNA RNA cryptography secret writing Ambiguity steganography biological simulation.