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Reseach Article

String Kernel Approach for Efficient Extraction of Medical Relations

by Vrinda. V, R. Venkatesan
International Journal of Computer Applications
Foundation of Computer Science (FCS), NY, USA
Volume 119 - Number 15
Year of Publication: 2015
Authors: Vrinda. V, R. Venkatesan
10.5120/21146-4212

Vrinda. V, R. Venkatesan . String Kernel Approach for Efficient Extraction of Medical Relations. International Journal of Computer Applications. 119, 15 ( June 2015), 37-42. DOI=10.5120/21146-4212

@article{ 10.5120/21146-4212,
author = { Vrinda. V, R. Venkatesan },
title = { String Kernel Approach for Efficient Extraction of Medical Relations },
journal = { International Journal of Computer Applications },
issue_date = { June 2015 },
volume = { 119 },
number = { 15 },
month = { June },
year = { 2015 },
issn = { 0975-8887 },
pages = { 37-42 },
numpages = {9},
url = { https://ijcaonline.org/archives/volume119/number15/21146-4212/ },
doi = { 10.5120/21146-4212 },
publisher = {Foundation of Computer Science (FCS), NY, USA},
address = {New York, USA}
}
%0 Journal Article
%1 2024-02-06T23:04:09.798835+05:30
%A Vrinda. V
%A R. Venkatesan
%T String Kernel Approach for Efficient Extraction of Medical Relations
%J International Journal of Computer Applications
%@ 0975-8887
%V 119
%N 15
%P 37-42
%D 2015
%I Foundation of Computer Science (FCS), NY, USA
Abstract

This paper presents a methodology for building an application that can classify healthcare information. It extracts informative sentences from medical papers that mentions about diseases and treatments, and then recognizes semantic relations that exist between the entities in the informative sentences. Support Vector Machine algorithm with String Kernel is used for relation identification. The proposed system avoids unnecessary information and gives the user disease and Treatment related sentences from medical pages. Evaluation results for this approach show that the proposed methodology obtains reliable results. The string kernel approach is also compared with naïve bayes approach and it was found that string kernel approach outperforms naïve bayes method for classification. This technique can be integrated with any medical management system to make good decisions and in patient management system by automatically mining the biomedical information from digital repositories. This system enables easy access to medical information in rural areas where there is a relative shortage of physicians.

References
  1. Oana Frunza, Diana Inkpen, and Thomas Tran," A Machine Learning Approach for Identifying Disease-Treatment Relations in Short Texts", IEEE transactions on knowledge and data engineering, vol. 23, no. 6, June 2011
  2. Bertrand C. , Ernest F. and Zhang H. H. , Principles and theory for data mining and machine learning. USA: Springer, 2009, pp. 405-485.
  3. B. Rosario and M. A. Hearst, "Semantic Relations in Bioscience Text," Proc. 42nd Ann. Meeting on Assoc. for Computational Linguistics, vol. 430, 2004.
  4. Thorsten Joachims, "Text Categorization with Support Vector Machines: Learning with many relevant features", Dortmund, Germany, 1998
  5. Jongwoo Kim, Daniel X. Le, and George R. Thoma, "Naïve Bayes Classifier for Extracting Bibliographic Information from Biomedical Online Articles", Proc 2008 International Conference on Data Mining. Las Vegas, Nevada, USA. July 2008
  6. Khushbu Khamar, "Short Text Classification Using kNN Based on Distance Function", International Journal of Advanced Research in Computer and Communication Engineering Vol. 2, Issue 4, April 2013
  7. R. Bunescu and R. Mooney, "A Shortest Path Dependency Kernel for Relation Extraction," Proc. Conf. Human Language Technology and Empirical Methods in Natural Language Processing (HLT/ EMNLP), pp. 724-731, 2005.
  8. Samuel h. hawkins, John n. korecki, Voganand balagurunathan, Vuhuagu, Virendrakumar, Satrajitbasu, Llawrence o. hall, Dmitry b. goldgof, robert a. gatenby, and robert j. gillies, "Predicting Outcomes of Nonsmall Cell Lung Cancer Using CT Image Features", IEEE Transactions November 2014, volume 2
  9. Aditya Kumar Sehgal, Sanmay Das, Keith Noto, Milton H. Saier, Jr. , and Charles Elkan, "Identifying Relevant Data for a Biological Database: Handcrafted Rules versus Machine Learning", IEEE/ACM transactions on computational biology and bioinformatics, vol. 8, no. 3, may/june 2011
  10. Rohini L. Damahe, VeenaKulkarni, " A Framework for Processing XML data Using Eclat Algorithm", International Journal of Emerging Technology and Advanced, Volume 4, Issue 8, August 2014
  11. S. Gowrishanthi, Dr. Antony Selvadoss Thanamani, " Web page categorization using web mining", International Journal of Advanced Research in Computer Engineering & Technology (IJARCET) Volume 1, Issue 7, September 2012 .
  12. Jiri hynek, Karel Jezek, "Document classification using itemsets", Proceedings of International Conference MOSIS 2000, Czech Republic, May 2000.
  13. Huma Lodhihuma, Craig Saunders craig, John Shawe-Taylor , Nello Cristianini , Chris Watkins, "Text Classification using String Kernels", Journal of Machine Learning, 2002.
  14. C. M. Bishop, "Pattern Recognition and Machine Learning", Springer, 2006.
  15. Wu X. and Kumar V. , "The top ten algorithms in data mining" USA: CRC Press, 2009, p. 21, p. 93.
Index Terms

Computer Science
Information Sciences

Keywords

SVM String kernel Naïve Bayes Relation extraction.