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Reseach Article

Parallel Algorithm for Sorting a Signed Permutation by Reversals on MOT Interconnection Netwo

by Amritanjali, G. Sahoo
International Journal of Computer Applications
Foundation of Computer Science (FCS), NY, USA
Volume 1 - Number 10
Year of Publication: 2010
Authors: Amritanjali, G. Sahoo
10.5120/214-363

Amritanjali, G. Sahoo . Parallel Algorithm for Sorting a Signed Permutation by Reversals on MOT Interconnection Netwo. International Journal of Computer Applications. 1, 10 ( February 2010), 99-103. DOI=10.5120/214-363

@article{ 10.5120/214-363,
author = { Amritanjali, G. Sahoo },
title = { Parallel Algorithm for Sorting a Signed Permutation by Reversals on MOT Interconnection Netwo },
journal = { International Journal of Computer Applications },
issue_date = { February 2010 },
volume = { 1 },
number = { 10 },
month = { February },
year = { 2010 },
issn = { 0975-8887 },
pages = { 99-103 },
numpages = {9},
url = { https://ijcaonline.org/archives/volume1/number10/214-363/ },
doi = { 10.5120/214-363 },
publisher = {Foundation of Computer Science (FCS), NY, USA},
address = {New York, USA}
}
%0 Journal Article
%1 2024-02-06T19:45:52.238213+05:30
%A Amritanjali
%A G. Sahoo
%T Parallel Algorithm for Sorting a Signed Permutation by Reversals on MOT Interconnection Netwo
%J International Journal of Computer Applications
%@ 0975-8887
%V 1
%N 10
%P 99-103
%D 2010
%I Foundation of Computer Science (FCS), NY, USA
Abstract

The problem of sorting a signed permutation by reversals is inspired and motivated by comparative genomics. Following the first polynomial time solution of this problem, several improvements have been published on the subject. The currently fastest algorithms is defined by the sequence augmentation sorting algorithm using balanced binary tree with running time O(n3/2√log n). We give a parallel implementation of the sequence augmentation sorting algorithm on the Mesh of trees architecture.

References
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Index Terms

Computer Science
Information Sciences

Keywords

Genome rearrangements Sorting by reversals Interconnection network Time complexity